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Agro-Ecology and Cropping Systems

Ecophysiology research for improved water use efficiency and soil health in cropping systems

Research for healthy production systems

Our Agro-Ecology and Cropping Systems program focuses on the ecophysiological mechanisms of soil-plant-water interactions for improving water use efficiency and soil health in cropping systems. Our main research areas are:

  • Characterization of plant traits for improved water acquisition, adaptation and resistance to abiotic and biotic stresses;
  • Application of ground-based sensors for remote detection of soil, plant root and canopy features;
  • Quantification of soil parameters that indicate microbial and root activities under natural and managed ecosystems; and
  • Quantitative models that describe soil water movement, plant root water uptake in agricultural soils.

Recent Presentations

  • “Plant water potentials: their components and rapid and remote measurement to detect crop water stress in field crops”. A seminar hosted by the department of Environmental Sciences at the University of Puerto Rico Rio Piedras. 10:00 am CST, February 20, 2025. (delivered virtually)
  • “Crop Physiology and Agroecology at Texas A&M Uvalde”. The Agricultural Engineering Graduate Program, Federal University of Rondonópolis, Mato Grosso, Brazil. December 11, 2024.
  • “Water Resources Science and Technology Fall Seminar Series: Dr. Xuejun Dong (Texas A&M AgriLife Research Center at Uvalde ).”  Texas A&M University – San Antonio,  (November 9, 2023). Videos. 15.  https://digitalcommons.tamusa.edu/water_videos/15
  • “Crop Physiology and Agroecology at Texas A&M Uvalde”. The Agricultural Engineering Graduate Program, Federal University of Rondonópolis, Mato Grosso, Brazil. December 11, 2024.

Drs. Tonny Silva, Adna Bonfim-Silva, and Thiago Duarte, and graduate students at the Agricultural Engineering Graduate Program, Federal University of Rondonópolis, Mato Grosso, Brazil.

Dr. Xuejun Dong’s online postings at zenodo.org (free downloading) Link

Publications

Selected Publications (2020-2025):

X. Dong, G. Feng, and I. Zemach. 2020. Using normalized difference vegetation index to estimate sesame drydown and seed yield. Journal of Crop Improvementdoi: 10.1080/15427528.2020.1846101.

X. Dong, D. A. Mott, Q. Zhou, and B. M. McKnight. 2025. Does sample size of leaf osmotic potential significantly affect the evidence of its association with cotton yield? Journal of Arid Environments. 229, 105387. https://doi.org/10.1016/j.jaridenv.2025.105387

J. Sunoj, V. S., X. Dong, M. V. Joshi, R. W. Jessup, D. I. Leskovar, and D. D. Baltensperger. 2025. Foliar gas exchange, morphology, and cannabinoid contents of three hemp varieties in southwest Texas. Agrosystems, Geosciences & Environment, e70101. https://doi.org/10.1002/agg2.70101

G. F. Lima, T. F. Duarte, T. J. A. da Silva, E. M. Bonfim-Silva, X. Dong, L. A. M. Meneghetti, and A. S. C. Custódio. 2025. Determination of field capacity in Oxisol by the flux density method, Arya-Paris model and pressure chamber. Brazilian Journal of Agricultural and Environmental Engineering (Agriambi Journal). 29 (3): e283074.

T. F. Duarte, E. M. Bonfim-Silva, T. J. A. da Silva, P. F. da Silva, L. A. M. Meneghetti, X. Dong, and M. de Oliveira Matosa. 2024. Construction and evaluation of an alternative tension infiltrometer in Oxisol under wood ash management. Brazilian Journal of Agricultural and Environmental Engineering (Agriambi Journal). 28 (12): e283076.

K. Qin, X. Dong, and D. I. Leskovar. 2023. Improving tomato nitrogen use efficiency with lignite-derived humic substances. Scientia Horticulturae, 321: 112243. https://doi.org/10.1016/j.scienta.2023.112243

J. Sunoj Valiaparambil Sebastian, X. Dong, C. Trostle, H. Pham, M. V. Joshi, R. W. Jessup, M. D. Burow, and T. L. Provin. 2023. Hemp agronomy: current advances, questions, challenges, and opportunities. Agronomy, 13, 475. https://doi.org/10.3390/agronomy13020475

X. Dong, G. Feng, S. Sieckenius, and D. I. Leskovar. 2023. Effect of mustard cover crops on corn growth, yield and soil water storage in southwest Texas. Arid Land Research and Management. 37(2): 265-283.  https://doi.org/10.1080/15324982.2022.2130114

Dong, 2022. How to put plant root uptake into a soil water flow model. F1000Research 5,43 Revised version, https://doi.org/10.12688/f1000research.7686.2

O. Hinson, C.B. Adams, X. Dong, Q. Xue, S. Thapa, G. Feng, E. Kimura, B. Pinchak, A. Somenahally, and A. M. H. Ibrahim. 2022. Path analysis of phenotypic factors associated with grain protein in dryland winter wheat. Journal of Crop Improvement. 36: 892-918. https://doi.org/10.1080/15427528.2022.2042882

X. Dong, D. A. Mott and B. M. McKnight. 2022. Leaf osmotic potential and morphological traits of 43 cotton varieties growing in a rainfall gradient from southwest to central Texas – an update. In Boyd, S., Human, M., Krogman,L., and Sarkissian, A., editors, Proceedings of the 2022 Beltwide Cotton Conferences, pages 562-569, San Antonio Rivercenter. National Cotton Council of America.

X. Dong, B. Peng, S. Sieckenius, R. Raman, M. M. Conley, D. I. Leskovar. 2021. Leaf water potential of field crops estimated using NDVI in ground-based remote sensing – opportunities to increase prediction precision. PeerJ 9:e12005 DOI 10.7717/peerj.12005

X. Dong and D. A. Mott. 2021. Leaf osmotic potential and morphological traits of 43 cotton varieties growing in a rainfall gradient from southwest to central Texas. In Boyd, S., Human, M., Krogman,L., and Sarkissian, A., editors, Proceedings of the 2021 Beltwide Cotton Conferences, pages 193-197, Virtual. National Cotton Council of America.

Research projects

Crop Modeling to Increase Crop Production Efficiency

Our study of crop modeling is deepening our understanding of the process of transpiration by linking stomatal conductance to canopy energy transfers for field crops. Additionally, we are identifying options for improving cropping system productivity by using the DSSAT-Cropping System Models under various scenarios of water/fertility management and crop rotations. This study is helping us…

Learn more Crop Modeling to Increase Crop Production Efficiency

Field Phenotyping for Crop Improvements

We obtained an initial success in detecting fine root biomass of winter wheat and energy cane using the ground penetrating radar (GPR) system attached with a 1600 MHz antenna. This progress provides hope for predicting crop fine root biomass remotely under field conditions. In collaboration with wheat breeders, we are developing methods for predicting leaf…

Learn more Field Phenotyping for Crop Improvements

Program Faculty and Staff

Xuejun Dong, Ph.D.

Associate Professor of Agronomy, Principal Investigator, Texas A&M AgriLife Research

830-988-6136

Publications

A full selection of Dr. Dong’s publications is available at TAMU Scholars along with information about researchers and peer-reviewed publications across The Texas A&M University System.